Knowledge Graphs can play together: Addressing knowledge graph alignment from ontologies in the biomedical domain
Abstract
We introduce DomainKnowledge, a system that leverages a pipeline for triple extraction from natural text and domain-specific ontologies leading to knowledge graph construction. We also address the challenge of aligning text-extracted and ontology-based knowledge graphs using the biomedical domain as use case. Finally, we derive graph metrics to evaluate the effectiveness of our system compared to a human baseline.
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